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Bioinfo-0.1.15
River stage zero No dependents
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Changes for version 0.1.15

  • Change: 88d8b7d260706fe45deaa2abd11ea0c55931a055 Author: Yan Xueqing <yanxueqing621@163.com> Date : 2019-09-24 10:41:58 +0000
    • Fixed local parallel mode:thread, evalue and outfmt parameter failure
  • Plus 17 releases after 2019-07-26 00:00:00 +0000.

Documentation

biotools
a bioinformatics toolkit that I used often

Modules

Bioinfo
my perl module and CLIs for Biology
Bioinfo::App
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Blast
various operator related to Blast+
Bioinfo::App::Cmd::Blast::Cmd::ParseXML
parse XML file of blast+(with outfmt=5) into tabular format
Bioinfo::App::Cmd::Blast::Cmd::SplitSubmit
submit blast after splitting a fasta file into multiple files;
Bioinfo::App::Cmd::Blast::Cmd::SplitSubmitB
submit blast after splitting a fasta file into multiple files;
Bioinfo::App::Cmd::Fasta
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Fasta::Cmd::GetByID
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Fasta::Cmd::Split
my perl module and CLIs for Biology
Bioinfo::App::Cmd::Fasta::Cmd::SplitBlast
my perl module and CLIs for Biology
Bioinfo::Fasta
get one or more sequences from a FASTA file quickly.
Bioinfo::PBS
my perl module and CLIs for Biology
Bioinfo::PBS::Queue
used to submit a batch of task to Torque cluster

Other files